BEAM LAB
Benchmarking all-atom biomolecular structure prediction with FoldBench
Nature Communications 2025

Benchmarking all-atom biomolecular structure prediction with FoldBench

Cryo-EM reveals mechanisms of natural RNA multivalency
Science 2025

Cryo-EM reveals mechanisms of natural RNA multivalency

π-PrimeNovo: accurate non-autoregressive deep learning for de novo peptide sequencing
Nature Communications 2025

π-PrimeNovo: accurate non-autoregressive deep learning for de novo peptide sequencing

ViraHinter: a dual-modal artificial intelligence framework for predicting virus-host interactions
arXiv

ViraHinter: a dual-modal artificial intelligence framework for predicting virus-host interactions

Accurate de novo sequencing of the modified proteome with OmniNovo
arXiv

Accurate de novo sequencing of the modified proteome with OmniNovo

MassNet: billion-scale AI-friendly mass spectral corpus enables robust de novo peptide sequencing
bioRxiv

MassNet: billion-scale AI-friendly mass spectral corpus enables robust de novo peptide sequencing

Research

We focus on AI for science.

Publications →
Focus

Agentic systems for scientific discovery

Autonomous reasoning and workflow automation for evidence synthesis, target discovery, and experimental design.

Agentic systems for scientific discovery
Focus

Foundation models for drug discovery

Developing foundation models that connect sequence, structure, and function across genomes, proteins and small moleculars.

Foundation models for drug discovery
Focus

Virtual cell modeling and simulation

Building computational models that simulate cellular processes, integrating multi-omics data for biological discovery.

Virtual cell modeling and simulation
Join us

We are recruiting.

BEAM Lab is actively recruiting at Shanghai AI Lab and Fudan University. We focus on AI for Science and Large Language Models.

Candidates with backgrounds in CS, Math, Physics, Biology, or Chemistry are highly valued. Send your CV and transcripts to:

[email protected]

PhD Students

Open for Fall 2027

Research Interns

Open positions available

Research Scientists

Open positions available

Postdocs & RAs

Open positions available

About Us

BEAM LAB

BEAM (Biological Engineering And Machine learning in Bioinformatics) Lab develops AI methods for scientific discovery, with emphasis on foundation models connecting biomolecular sequence, structure, and function.

  • Biomolecular modeling: proteins, antibodies, and RNA

  • Structure prediction/design, proteomics, and AI-driven drug discovery

  • Virtual cell modeling and simulation

  • Agentic science for autonomous reasoning and research workflows